The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.
A napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images.
A tool for heart segmentation and congenital heart defect detection in mice.
3D Segment ascidian embryos using cellpose. The images are first rescaled to be isotropic and then downscaled, before cellpose is used. The resulting labels are upscaled to match the original data.
A simple plugin to use phasor analysis
Napari plugin for Spotiflow
A napari plugin for segmentation using vision transformer features
eHooke implementation within napari
A plugin for writing svg files with napari
Save multidimensional file as folder of tifs
3D lasso tool to select large 3D areas
A visual pipeline to process images with Tapenade in Napari
napari widgets to (batch) process images from start to finish.
napari/OMERO interoperability
Registration of 3D movies applied to all channels
Reads lung slides with AI-driven and classical methods