Feature Forest
featureforestA napari plugin for segmentation using vision transformer features
First released:
10 October 2024Last updated:
25 April 2025Installs:
144Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
Plugins
Browse plugins: 500
vollseg-napari-trackmate
vollseg-napari-trackmateTrack analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library
- Varun Kapoor
- Mari Tolonen
- Jakub Sedzinski
First released:
31 December 2022Last updated:
25 April 2025Installs:
1.6KPlugin type:
Sample data, Widget
T-MIDAS
napari-tmidasA plugin for batch processing of confocal and whole-slide microscopy images of biological tissues
- Marco Meer
First released:
05 March 2025Last updated:
24 April 2025Installs:
112Plugin type:
Reader, Sample data, Widget, Writer
Workflow step:
Image segmentation
Image annotation
SAM2Long
napari-sam2longA plugin for interactive 3D (volumetric or time-lapse) segmentation using Meta's Segment Anything Model 2 (SAM2).
- Mai Hoang
First released:
14 April 2025Last updated:
22 April 2025Installs:
49Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
napari spatialdata
napari-spatialdataInteractive visualization of spatial omics data with napari
- giovanni palla
First released:
06 July 2022Last updated:
21 April 2025Installs:
13KPlugin type:
Reader, Widget
Frontveg
frontvegSegmentation of vegetation located to close to camera
- Herearii Metuarea
First released:
20 April 2025Last updated:
20 April 2025Installs:
10Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
PSSR2
pssrPoint-Scanning Super-Resolution 2
- Hayden Stites
First released:
17 April 2024Last updated:
17 April 2025Installs:
361Plugin type:
Widget
napari prism
napari-prismA Python package for the inteRactive and Integrated analySis of Multiplexed tissue microarrays
- Rafael Tubelleza
First released:
14 November 2024Last updated:
16 April 2025Installs:
180Plugin type:
Reader, Widget
PSF Generator
napari-psfgeneratorPlugin to compute the focal electric field
First released:
05 February 2025Last updated:
16 April 2025Installs:
40Plugin type:
Reader, Sample data, Widget, Writer
Easy Augment Batch DL
napari-easy-augment-batch-dlA plugin to perform unet based deep learning with a small number of labels and augmentation
- Brian Northan
First released:
18 August 2024Last updated:
11 April 2025Installs:
109Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
Mask Analyzer
napari-mask-densityA napari plugin for analyzing mask density in regions of interest
- Da Kuang
First released:
11 April 2025Last updated:
11 April 2025Installs:
9Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
psf-analysis-CFIM
psf-analysis-CFIMA continuation of napari_psf_analysis, developed for CFIM - KU
- Markus L. Bille
First released:
11 February 2025Last updated:
11 April 2025Installs:
132Plugin type:
Reader, Widget
Fit Ellipsoid
fitellipsoidA plugin to that fits an ellipsoid to a set of user clicked points in 3D
- Pierre Weiss
First released:
08 April 2025Last updated:
11 April 2025Installs:
35Plugin type:
Widget
MMV-Region Segmentation
mmv-regionsegNapari plugin for the segmentation of regions by flood
First released:
21 March 2025Last updated:
10 April 2025Installs:
29Plugin type:
Widget
Workflow step:
Image segmentation
brainrender
brainrender-napariA napari plugin to render BrainGlobe atlases and associated data as layers.
First released:
13 October 2023Last updated:
10 April 2025Installs:
4.7KPlugin type:
Widget