Laber Manager
napari-laber-managerA plugin for management of label colormap generation and opacity control
- JH Wang
First released:
07 July 2025Last updated:
07 July 2025Installs:
0Plugin type:
Widget
Plugins
Browse plugins: 513
ndev Sampledata
ndev-sampledataSample data for the ndev kit
- Tim Monko
First released:
05 July 2025Last updated:
07 July 2025Installs:
8Plugin type:
Sample data
3D Counter
napari-3d-counterA simple plugin for counting objects in 3D images
- Peter Newstein
First released:
18 October 2023Last updated:
07 July 2025Installs:
690Plugin type:
Widget
seu-3d
seu-3d3d spatial visualization napari plugin
First released:
26 May 2025Last updated:
07 July 2025Installs:
173Plugin type:
Widget
molSEEQ
napari-molseeqA Napari plugin for extracting single molecule sequences from single/multi-channel SMLM microscopy data.
- Piers Turner
First released:
25 July 2024Last updated:
06 July 2025Installs:
101Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
Bioio Reader
napari-bioio-readerA simple plugin to use the Bioio reader in napari
- Laurent Guerard
First released:
04 July 2025Last updated:
04 July 2025Installs:
6Plugin type:
Reader
psf-analysis-CFIM
psf-analysis-CFIMA continuation of napari_psf_analysis, developed for CFIM - KU
- Markus L. Bille
First released:
11 February 2025Last updated:
04 July 2025Installs:
145Plugin type:
Reader, Widget
AxonDeepSeg
AxonDeepSegAxon/Myelin segmentation using AI
First released:
09 December 2017Last updated:
03 July 2025Installs:
2.8KPlugin type:
Widget
Workflow step:
Image segmentation
Image annotation
ebi_oct
ebi-octA package for analyzing optical coherence tomography (OCT) images for biofilm.
First released:
03 July 2025Last updated:
03 July 2025Installs:
6Plugin type:
Widget
TARDIS-em napari plugin
napari-tardis-emTomogram and micrograph segmentation with TARDIS-em
- Robert Kiewisz
First released:
22 July 2024Last updated:
02 July 2025Installs:
392Plugin type:
Reader, Widget
napari NanoPyx
napari-nanopyxnapari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
- Ricardo Henriques
- Bruno Saraiva
- Inês Cunha
- António Brito
First released:
10 May 2023Last updated:
02 July 2025Installs:
721Plugin type:
Widget
Leonardo-DeStripe
LSFM-destripe-napariA simple plugin to destripe microscopy images in napari
- lennart kowitz
First released:
12 December 2024Last updated:
02 July 2025Installs:
150Plugin type:
Reader, Widget, Writer
Workflow step:
Visualization
Leonardo-Fuse
LSFM-fusion-napariA simple plugin to fuse microscopy images in napari
- lennart kowitz
First released:
13 December 2024Last updated:
02 July 2025Installs:
161Plugin type:
Widget, Writer
Workflow step:
Visualization
Segment Anything V2
napari-SAMV2Napari plugin for segment anything version 2 model from meta. Plugin primarily useful for segmenting 3d volumetric data or 3d time series data.
- Krishnan Venkataraman
First released:
08 October 2024Last updated:
01 July 2025Installs:
734Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
Microscopy Array Section Setup
napari-massMicroscopy Array Section Setup napari plugin
- Joost de Folter
First released:
30 June 2025Last updated:
30 June 2025Installs:
10Plugin type:
Reader, Widget
Workflow step:
Image annotation
Image segmentation