AxonDeepSeg
AxonDeepSegAxon/Myelin segmentation using AI
First released:
09 December 2017Last updated:
27 June 2025Installs:
2.1KPlugin type:
Widget
Workflow step:
Image annotation
Image segmentation
Plugins
Browse plugins: 509
ImageGrains
napari-imagegrainsAn interactive napari plugin for the ImageGrains software.
First released:
26 June 2025Last updated:
26 June 2025Installs:
0Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
napari-chatgpt | Omega
napari-chatgptA napari plugin to process and analyse images with chatGPT.
- Loic A. Royer
- contributors
First released:
03 May 2023Last updated:
26 June 2025Installs:
2.6KPlugin type:
Widget
seu-3d
seu-3d3d spatial visualization napari plugin
First released:
26 May 2025Last updated:
25 June 2025Installs:
0Plugin type:
Widget
Hyperspectral Imaging Analysis Plugin
napari-hsi-analysisNapari plugin to perform analysis on Hyperspectral Imaging datasets.
- Alessia Di Benedetto
First released:
12 March 2025Last updated:
23 June 2025Installs:
82Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
pyav video plugin
napari-pyavNapari plugin for reading videos using PyAV
- jlab.berlin
First released:
05 October 2024Last updated:
23 June 2025Installs:
83Plugin type:
Reader
Workflow step:
Image segmentation
Image annotation
FLIM phasor plotter
napari-flim-phasor-plotterA plugin that performs phasor plot from TCSPC FLIM data.
- Marcelo L. Zoccoler
- Cornelia Wetzker
First released:
17 August 2023Last updated:
23 June 2025Installs:
532Plugin type:
Reader, Sample data, Widget
Workflow step:
Image annotation
Image segmentation
Proofread Brainbow
napari-proofread-brainbowProofreading Brainbow images with napari
- Seongbin Lim
First released:
30 August 2022Last updated:
23 June 2025Installs:
255Plugin type:
Widget
Workflow step:
Image annotation
Feature Forest
featureforestA napari plugin for segmentation using vision transformer features
First released:
10 October 2024Last updated:
22 June 2025Installs:
177Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
napari NanoPyx
napari-nanopyxnapari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
- Ricardo Henriques
- Bruno Saraiva
- Inês Cunha
- António Brito
First released:
10 May 2023Last updated:
21 June 2025Installs:
644Plugin type:
Widget
TARDIS-em napari plugin
napari-tardis-emTomogram and micrograph segmentation with TARDIS-em
- Robert Kiewisz
First released:
22 July 2024Last updated:
20 June 2025Installs:
292Plugin type:
Reader, Widget
Annotation Toolbox
napari-nD-annotatorA toolbox for annotating objects one by one in nD
- David Bauer
- Jozsef Molnar
- Dominik Hirling
First released:
01 June 2022Last updated:
20 June 2025Installs:
2.9KPlugin type:
Widget
ROXAS AI
napari-roxas-aiA plugin that integrates the ROXAS AI analysis methods for quantitative wood anatomy in the napari platform
- Nicola Antonio Santacroce
- Marc Katzenmaier
- Triyan Bhardwaj
- Georg von Arx
First released:
17 May 2025Last updated:
19 June 2025Installs:
0Plugin type:
Reader, Sample data, Widget, Writer
Workflow step:
Image annotation
Image segmentation
napari clusters plotter
napari-clusters-plotterA plugin to use with napari for clustering objects according to their properties
- Laura Zigutyte
- Ryan Savill
- Marcelo Zoccoler
- Thorsten Wagner
- Robert Haase
First released:
15 November 2021Last updated:
17 June 2025Installs:
8.6KPlugin type:
Sample data, Widget
PSF Generator
napari-psfgeneratorPlugin to compute the focal electric field
First released:
05 February 2025Last updated:
17 June 2025Installs:
43Plugin type:
Reader, Sample data, Widget, Writer