The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.
A plugin to browse OME-Zarr plates by conditions and load images, labels and features from ROIs
napari-OMAAS stands for Optical Mapping Acquisition and Analysis Software
eHooke implementation within napari
A simple plugin to color and merge z-planes of 3D data to give depth information.
A visual pipeline to process images with Tapenade in Napari
A napari plugin for registration to a BrainGlobe atlas.
A napari plugin to render BrainGlobe atlases and associated data as layers.
Quantifying 2D cell shape and epithelial tissue dynamics
A simple plugin to filter labels by properites.
A plugin for segmentation by pixel classification using pre-trained neural networks for feature extraction
Napari plugin to manually correct epithelia segmentation in movies
Automated 3D cell detection in large microscopy images
A simple plugin to destripe microscopy images
Interactive visualization of spatial omics data with napari
A napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images.