The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.
A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.
Tissue Microscopy Image Data Analysis Suite
A classification plugin for the ROIs of a segmentation mask. If you face problems opening the Napari-hub page, try replacing napari-svetlana by napari_svetlana in the URL.
Napari plugin for ROP data copying and segmentation assistance.
A Napari plugin to detect and count nuclei on phase contrast images
Analysis of body movement
A framework to annotate single neurons at whole-brain scale
A napari plugin for cell segmentation with SAMCell 1.0
Stitch napari image layers in 2-3D+t
A simple plugin to use DinoSim in napari
Napari plugin to perform analysis on Hyperspectral Imaging datasets.
A napari plugin to detect and visualize collective signaling events
Napari plugin to manually correct epithelia segmentation in movies
A continuation of napari_psf_analysis, developed for CFIM - KU
3D U-Net model for the segmentation of the lungs in mice CT scans.