skan
skanSkeleton analysis in Python
First released:
08 November 2016Last updated:
17 July 2025Installs:
95KPlugin type:
Widget
Plugins
Browse plugins: 515
Automatic Range
napari-automatic-rangeAn open‑source, reproducible intensity‑scaling method that leverages the nuclear signal as an anchor to calibrate per‑channel contrast.
- Pacôme Prompsy
First released:
15 July 2025Last updated:
17 July 2025Installs:
0Plugin type:
Reader, Sample data, Widget, Writer
Controls
fspi-analysisA simple plugin to perform fspi analysis within napari
- Olivier Cahn
First released:
18 May 2025Last updated:
17 July 2025Installs:
22Plugin type:
Widget
napari-SAM4IS
napari-SAM4ISCreate annotations for instance segmentation using Segment Anything models
First released:
28 April 2023Last updated:
17 July 2025Installs:
516Plugin type:
Widget
napari-SAMV2
napari-SAMV2Napari plugin for segment anything version 2 model from meta. Plugin primarily useful for segmenting 3d volumetric data or 3d time series data.
- Krishnan Venkataraman
First released:
08 October 2024Last updated:
16 July 2025Installs:
765Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
napari clusters plotter
napari-clusters-plotterA plugin to use with napari for clustering objects according to their properties
- Laura Zigutyte
- Ryan Savill
- Marcelo Zoccoler
- Thorsten Wagner
- Robert Haase
First released:
15 November 2021Last updated:
16 July 2025Installs:
9.5KPlugin type:
Sample data, Widget
vollseg-napari
vollseg-napariIrregular cell shape segmentation using VollSeg
- Varun Kapoor
First released:
10 December 2021Last updated:
16 July 2025Installs:
5.7KPlugin type:
Sample data, Widget
Data Inspection
napari-data-inspectionData Inspection Plugin, designed to streamline file navigation and enhance the efficiency of data inspection.
- Lars Krämer
First released:
16 June 2025Last updated:
16 July 2025Installs:
42Plugin type:
Widget
SimpleAnnotate
napari-simpleannotateA napari plugin for simple image and video annotation
First released:
29 October 2023Last updated:
16 July 2025Installs:
209Plugin type:
Widget
Napari Event Monitor
napari-event-monitorDynamic event monitoring and diagnostics in napari
First released:
16 July 2025Last updated:
16 July 2025Installs:
17Plugin type:
Widget
MolTrack
napari-moltrackA user-friendly SMLM analysis platfrom for napari, which includes single molecule localisation, tracking, and analysis features.
- Piers Turner
First released:
30 May 2024Last updated:
15 July 2025Installs:
1.4KPlugin type:
Widget
Workflow step:
Image annotation
Image segmentation
Feature Forest
featureforestA napari plugin for segmentation using vision transformer features
First released:
10 October 2024Last updated:
15 July 2025Installs:
216Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
DINOSim Segmentation
napari-dinosimA simple plugin to use DINOSim in napari
- Aitor Gonzalez-Marfil
First released:
05 March 2025Last updated:
15 July 2025Installs:
179Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
seu-3d
seu-3d3d spatial visualization napari plugin
First released:
26 May 2025Last updated:
14 July 2025Installs:
228Plugin type:
Widget
napari-UniSPAC
napari-UniSPACA Unified Segmentation framework for Proofreading and Annotation in Connectomics (UniSPAC)!
First released:
07 February 2025Last updated:
11 July 2025Installs:
94Plugin type:
Widget