The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.
A Napari plugin for extracting single molecule sequences from single/multi-channel SMLM microscopy data.
Sample data for the ndev kit
3d spatial visualization napari plugin
A simple plugin to use the Bioio reader in napari
A continuation of napari_psf_analysis, developed for CFIM - KU
Axon/Myelin segmentation using AI
A package for analyzing optical coherence tomography (OCT) images for biofilm.
Tomogram and micrograph segmentation with TARDIS-em
napari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
A simple plugin to destripe microscopy images in napari
A simple plugin to fuse microscopy images in napari
Napari plugin for segment anything version 2 model from meta. Plugin primarily useful for segmenting 3d volumetric data or 3d time series data.
A simple plugin for counting objects in 3D images
Microscopy Array Section Setup napari plugin
A comprehensive napari plugin for NIfTI file analysis and visualization